PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Home  BLAST  Prediction  RegMap  ATRM  Download  Help  About  Links
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.MB6LX
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 335aa    MW: 37820.2 Da    PI: 4.76
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.MB6LXgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.3e-10150193755
                  HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  + ErrRR+r+++++  Lr+l+P+      +K++Ka+i   A  Y+++Lq
  Aradu.MB6LX 150 ISERRRRSRMKEKLYALRSLVPNI-----TKMDKASIIGDALSYVHELQ 193
                  78*********************7.....7*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.51143192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.0E-17145208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-16145212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.43E-13145195No hitNo description
PfamPF000104.5E-8149193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-14149198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MDAHQETLIF NNDYEVHDFT EDPNFDQLIN LIRGDNNNED DAAVFFNYGS DIITNDCFLD  60
DNQNQNHLLL PYDQIHQSHN NNSSNEVMMN NVCGDDPSPT NLISSFSCFD EGVVNRENEG  120
EYSSATTTAT DEANLSGKPR LKADRSKTLI SERRRRSRMK EKLYALRSLV PNITKMDKAS  180
IIGDALSYVH ELQAQAKKLK AEVAGLEASL FVSENYKASF DDNYIKTVQV THNSHPINKK  240
IVQIEMVQVE ERGYYVKIVC NKGGGVAASL YRALESLVGF SVRNSNFETV CDTILLTFTL  300
NVKGFEPEVN LPNLKLWVTG ALLNQGFEFM ANFHY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935894.10.0PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
SwissprotQ0V7X41e-97FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLC0JP281e-137C0JP28_LOTJA; Putative basic helix-loop-helix protein BHLH21
STRINGGLYMA12G30240.11e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36793358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.15e-89FER-like regulator of iron uptake